Class NeuralNetworkParticleAnalyzer_

java.lang.Object
  org.shapelogic.imageutil.BaseImageOperation
      org.shapelogic.imageprocessing.BaseParticleCounter
          org.shapelogic.imageprocessing.ColorParticleAnalyzer
              org.shapelogic.imageprocessing.ColorParticleAnalyzerIJ
                  NeuralNetworkParticleAnalyzer_

All Implemented Interfaces:

ij.plugin.filter.ExtendedPlugInFilter, ij.plugin.filter.PlugInFilter, java.lang.Runnable, RecursiveContext, IParticleCounter, ImageOperation

public class NeuralNetworkParticleAnalyzer_
extends ColorParticleAnalyzerIJ

Field Summary

Fields inherited from class org.shapelogic.imageprocessing.ColorParticleAnalyzerIJ

_countOnlyStatic, _displayInternalInfoStatic, _gd, _iterationsStatic, _maxDistanceStatic, _maxPixelsInAreaStatic, _minPixelsInAreaStatic, _neuralNetworkFileStatic, _rt, _toMaskStatic, _useNeuralNetworkStatic

Fields inherited from class org.shapelogic.imageprocessing.ColorParticleAnalyzer

_areaStream, _aspectRatioStream, _curveArchCountStream, _edgeTracer, _grayValueStream, _hardCornerCountStream, _inflectionPointCountStream, _neuralNetworkFile, _particleStream, _perimeterStream, _polygonStream, _roundishStream, _tableBuilder, _tableDefinition, _useNeuralNetwork, _xMaxStream, _xMinStream, _yMaxStream, _yMinStream, loadLetterStreams, loadParticleStreams, loadPolygonStreams

Fields inherited from class org.shapelogic.imageprocessing.BaseParticleCounter

_backgroundArea, _backgroundColor, _backgroundCount, _boundingBoxArea, _categorizer, _colorHypothesis, _colorHypothesisFinder, _context, _countOnly, _displayInternalInfo, _displayTable, _inputColor, _iterations, _maxDistance, _maxPixelsInArea, _minPixelsInArea, _modifying, _paintBackground, _paintForground, _parentContext, _particleCount, _particleImage, _particlesFiltered, _particlesOrig, _referenceColor, _saveArea, _segmentation, _toMask, _useReferenceAsBackground, ITERATIONS_DEFAULTS, MAX_DISTANCE_DEFAULTS, MAX_PIXELS_IN_AREA_DEFAULTS, MIN_PIXELS_IN_AREA_DEFAULTS

Fields inherited from class org.shapelogic.imageutil.BaseImageOperation

_arg, _guiWrapper, _image, _keyValueParser, _setupReturnValue

Fields inherited from interface ij.plugin.filter.ExtendedPlugInFilter

KEEP_PREVIEW

Fields inherited from interface ij.plugin.filter.PlugInFilter

CONVERT_TO_FLOAT, DOES_16, DOES_32, DOES_8C, DOES_8G, DOES_ALL, DOES_RGB, DOES_STACKS, DONE, FINAL_PROCESSING, NO_CHANGES, NO_IMAGE_REQUIRED, NO_UNDO, PARALLELIZE_STACKS, ROI_REQUIRED, SNAPSHOT, STACK_REQUIRED, SUPPORTS_MASKING

Constructor Summary

NeuralNetworkParticleAnalyzer_()

Method Summary

protected void

categorizeStreams() Analyzes particles and group them. Not sure if I should use named streams or try to avoid it to make it more thread safe.

Methods inherited from class org.shapelogic.imageprocessing.ColorParticleAnalyzerIJ

displayInternalInfo, displayResultsTable, populateResultsTableRow, run, setNPasses, setup, setupTableBuilder, showDialog

Methods inherited from class org.shapelogic.imageprocessing.ColorParticleAnalyzer

customStreamDefinitions, defaultColumnDefinitions, defaultStreamDefinitions, defineNeuralNetwork, defineRules, getInternalInfo, init, makeBBoxStreams, populateResultsTable

Methods inherited from class org.shapelogic.imageprocessing.BaseParticleCounter

findBackground, findColorHypothesis, getColorHypothesisFinder, getContext, getImageArea, getInputColor, getIterations, getMaxDistance, getMinPixelsInArea, getParentContext, getParticleCount, getParticleFiltered, getSegmentation, getStatus, globalFilter, isParticleImage, isUseReferenceAsBackground, populateResultsTableRowCustom, run, segment, setColorHypothesisFinder, setDisplayTable, setInputColor, setIterations, setMaxDistance, setMinPixelsInArea, setToMask, setUseReferenceAsBackground, showResultDialog

Methods inherited from class org.shapelogic.imageutil.BaseImageOperation

getGuiWrapper, getImage, getKeyValueParser, getSetupReturnValue, isImageValid, setArg, setGuiWrapper, setKeyValueParser, setSetupReturnValue, setup, showAbout, showMessage

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.shapelogic.imageutil.ImageOperation

getGuiWrapper, getImage, getKeyValueParser, getSetupReturnValue, isImageValid, setArg, setGuiWrapper, setKeyValueParser, setSetupReturnValue, setup, showAbout, showMessage

Constructor Detail

NeuralNetworkParticleAnalyzer_

public NeuralNetworkParticleAnalyzer_()

Method Detail

categorizeStreams

protected void categorizeStreams()

Description copied from class: ColorParticleAnalyzer

Analyzes particles and group them.
Not sure if I should use named streams or try to avoid it to make it more thread safe.

Overrides:

categorizeStreams in class ColorParticleAnalyzer